PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027357933.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 334aa MW: 36467.8 Da PI: 6.772

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027357933.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12	0.0004	199	237	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq XP_027357933.1 199 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 237 6678889999999999998.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MNRGVLQSSP VQQMMTGNPN WWSININTMP PQAPPFLSTP SNFPSPYAPT SSLPFPSWHD 60 NNQDLPESWS HLLMSGVVGE EDKAGMGQFQ TKKLENWEDQ MLSQAPNASL VDVKQENSAS 120 SYVYGHGNEE LQSSKPSWSP KSCVTSFSSN MLDFSNNKTD ARHPPPDRSS ECNSIAAGGA 180 LKKARVQPSA TAQSTFKVRK EKLGDRITAL HQLVSPFGKT DTASVLLEAI GYIRFLQSQI 240 EALSLPYLSG GSGNTRQQHP VQGEKNCIFP EDPGQLLNEN CLKRKASGEQ DPQEEPKKCL 300 RSRGLCLVPV SCTLQVGSDN GADYWAPALG GGFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29100.1	1e-106	bHLH family protein