PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027357654.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB_related
Protein Properties Length: 270aa    MW: 29530.9 Da    PI: 9.4576
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027357654.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.28.8e-14100144347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r   ++Rt+ q+ s+ qky
   XP_027357654.1 100 PWTEEEHRTFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKY 144
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MGRKCSHCGN IGHNSRTCAS FRGSFVGVRL FGVQLDISSS SLSLKKSFSM DSLPSSSSPS  60
SSFSSSRISI DEHSDKASIG YLSDSDGLIV RAQERKKGVP WTEEEHRTFL VGLEKLGKGD  120
WRGISRNYVT TRTPTQVASH AQKYFIRLAS MNKKKRRSSL FDLVGGDSTN PISRSSNCKS  180
GDSVQTKSKC EVENDATLSL LRQETKSDEQ KSTDNYSQAE EHEAVPMWVH SQIKSSNNAA  240
TPDLELTLAV PKEQNKSSPG SFLLGPISVT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153157KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.19e-50MYB_related family protein