PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027357287.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARR-B
Protein Properties Length: 718aa    MW: 78883 Da    PI: 5.7102
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027357287.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like75.28.8e-24190243155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k++++Wt++LH+ F+ a++q+ G ++A+Pk+ile+m+ + Lt+e+v+SHLQkYR+
  XP_027357287.1 190 KQKVVWTTDLHNLFLLAIKQI-GMDRAVPKKILEIMNAPNLTRENVASHLQKYRM 243
                     799******************.********************************7 PP
2Myb_DNA-binding35.22.8e-11193242248
                      SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                        WTt+++ l++ a+kq G++   +k+I + m+  ++t++++ s++qky+
   XP_027357287.1 193 VVWTTDLHNLFLLAIKQIGMDraVPKKILEIMNaPNLTRENVASHLQKYR 242
                      68***********************************************7 PP
3Response_reg62.42.4e-21101161107
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     +l+vdD+++ + +++++l++ +y +v  a   + ale+l+e +  +Dl+++ + ++gm+G+e+ k   +e  ++p+i+++a + ++ + + l+ G
  XP_027357287.1  10 ILVVDDDDVSLAIVANILNSLEY-KVLIANGTHNALETLREFEgfVDLVITELHISGMNGFEFQKLVINEF-QIPVIMMSADSRKSVMSKSLENG 102
                     89*********************.*****************999*********************998877.8********************** PP

                     ESEEEESS--HHHH CS
    Response_reg  94 akdflsKpfdpeel 107
                     a  f+ Kpf +++ 
  XP_027357287.1 103 AAHFILKPFCRDDF 116
                     *********88876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 718 aa     Download sequence    
MACERVDVSI LVVDDDDVSL AIVANILNSL EYKVLIANGT HNALETLREF EGFVDLVITE  60
LHISGMNGFE FQKLVINEFQ IPVIMMSADS RKSVMSKSLE NGAAHFILKP FCRDDFKDIW  120
QFAMAARKGT VTTENIEGES TGDKVIVQDV NSSETSSLAK PKRKRKYGQR KNKQMSKEDQ  180
SEESSQLAKK QKVVWTTDLH NLFLLAIKQI GMDRAVPKKI LEIMNAPNLT RENVASHLQK  240
YRMFLRKVAE KGLVEGLSDR TLRSRFASGL SASLIRDIQT RTAKLRVPAQ PYLKRLAHQP  300
ENGGKANAVK PFNHVSRNAY VTPHGRSHHQ FPNAFHKGLN LMLQNQHVDS WNVSQSRYGS  360
NVGANSTHQK ILGSYANPMP YQAKISCNAG AGFPTCGING RGLMTSTNGL IGGLKYGEPM  420
YQNYVNSMGN HQNFSYGPGN GKTASLNSSN NQPWSTTSIY NPNTNIQLNG GSKMVGNGIK  480
GGFKSTVGAM DSIANNNNFS LINGTSQNAK MNVAPLGHGN FGLSQGGFGI ASASKAEDGW  540
SNEFPQTMIT NGTKAENSSG FPQFPHQLDD NVEENENLYN NATSIWESKF THLEDDLADI  600
FTVLDEMNLL NETDENPDAS EVLESILSGP RHDVQSLEQS IGAGDVIDNP NEGSLNLPNK  660
STTCSDKNSN QLEGYDGFGD MEPFDEFLVD DVSSATHSAI DQDWDMELIE ALFGDEAN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1162192KRKRKYGQRKNKQMSKEDQSEESSQLAKKQK
2163193KRKRKYGQRKNKQMSKEDQSEESSQLAKKQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07210.12e-49ARR-B family protein