PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027357108.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | NF-YA | ||||||||
Protein Properties | Length: 324aa MW: 36018 Da PI: 9.6498 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 103.5 | 2e-32 | 169 | 225 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rak+e ekk+ +k+rkpylheSRh hA+rR+Rg+gGrF XP_027357108.1 169 EEPVYVNAKQYHGILRRRQSRAKAELEKKV-IKARKPYLHESRHLHAMRRARGNGGRF 225 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MPGKPDTDDW RGEQIQFQTS VYSHHQPWWR GVGENASKSP SSVHLNGSIM NGVTGSETNE 60 DLAERVDFNR QRHPMVSPSL SGTDKSGGGV AKEYQSIKDA MSSTPFTVGK HIGPNSQMEF 120 VGHSVVLTSP YSDAQYGQIL TTYGQQVMIN PQVYGIHHAR MPLPLEMEEE PVYVNAKQYH 180 GILRRRQSRA KAELEKKVIK ARKPYLHESR HLHAMRRARG NGGRFLNTKK LENNNSNTTL 240 DKDNSIGANP STNSPATQHF LTNNENLGSS HASQCIVQDM HRMHSFNIGF HDGNGLSALY 300 HSQANGKKEG GYFGKERDPN GAVK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12840.2 | 4e-36 | NF-YA family protein |