PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027356987.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 906aa    MW: 100844 Da    PI: 5.3507
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027356987.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.23.7e-24123224199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae+        ++++ s++l+++d++ +sW++++iyr++++r++lt+GW+ Fv +++Lk+gD+v+F +dg  +
  XP_027356987.1 123 FCKTLTASDTSTHGGFSVPRRAAERLfppldyTIQPP-SQELVVRDLHDNSWTFRHIYRGHPKRHLLTTGWSLFVGSKRLKAGDSVLFIRDG--K 214
                     99*********************999****9865655.569************************************************666..4 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l+v+v+r 
  XP_027356987.1 215 SQLLVGVRRG 224
                     556****986 PP
2Auxin_resp110.32e-36249332183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa++++ F+++YnPra++seFv++++k++ka++ +++s+G Rf m+fete+s +rr++Gt+vg+sdldp+rWp+SkWr+++
  XP_027356987.1 249 AAHAAANQTLFTIFYNPRACSSEFVIPMAKYRKAIYeTQLSIGLRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNIQ 332
                     79*********************************989*******************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 906 aa     Download sequence    
MKLPREMKEH YGEPKTLNWE LWHACAGPLV CLPQVGSLSY YFPQGHCEQV AACTRMTVTS  60
QIPNYPNLPS QLLCQVQNVT LHADKETDEI YAQMSLQPLN SEKDVFPISE FGLMASSHPT  120
EFFCKTLTAS DTSTHGGFSV PRRAAERLFP PLDYTIQPPS QELVVRDLHD NSWTFRHIYR  180
GHPKRHLLTT GWSLFVGSKR LKAGDSVLFI RDGKSQLLVG VRRGNRQQTS LPSSVLSADS  240
MHIGVLAAAA HAAANQTLFT IFYNPRACSS EFVIPMAKYR KAIYETQLSI GLRFGMMFET  300
EESGKRRYMG TIVGISDLDP LRWPGSKWRN IQVEWDEPGC SDKQNRVSSW DIETPESLFT  360
FPSFTSSLKR PFQPGLLGNE WSALLRKPFM QVLENGTVEL SNSFQNLYSE HMMKNLFKPQ  420
LVSNTGNCLW IRQEESSAKR GPLGEVNTTL PMTYQKVNLA SLVSIPLSNI HCQSEPNQSS  480
ALNLHKPLKS DQLDTLHPLA KIENPLSTGT VTDKPKLESE GLGGCIFDFP YMDCSNIEKM  540
APTSVSSQSF VDQVTFLNQN HIPLVVDIPQ SESAIVNGSL PQLDIDEWMV CSSSQPLVGQ  600
NRSTEPLTAL QEQSVLHSQA INLPFPSMSQ NMWDPYVQNL KLLPQADQQT SISQQGQYSL  660
SCISSSNNLR DFSAESNNQS EIYNSDNVDG NNIINDSIAD LSTSSAILDE FCSFKERDFK  720
NPSERMVNNL SASQDVQSQI TSASLVESHA FSLQDIPDSS GGASSSHVDF DESSFLQKNS  780
WPQVAAQPAP RRRTYTKVQK AGSVGRSIDV TTFKNYEELI RAIECMFGLQ GLLNDTRGSG  840
WKLVYVDYEN DVLLVGDDPW EEFVGCVKCI RILSPTEVQQ MSEEGMKLLN SGALQGISGC  900
MSGACT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein