PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027356978.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ERF | ||||||||
Protein Properties | Length: 237aa MW: 26198.7 Da PI: 4.5906 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.3 | 1.8e-18 | 34 | 83 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ykGVr++ +g+WvAeIr+p + r +r +lg+f t eAa a++aa++kl+g XP_027356978.1 34 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFETSHEAALAYDAAARKLYG 83 69****999.**********8...3.35************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MRIDEKKQLK KTAQASSRKG CMRGKGGPEN ASCTYKGVRQ RTWGKWVAEI REPNRGARLW 60 LGTFETSHEA ALAYDAAARK LYGSDAKLNL PELSVSMQPQ CPPSSVTIPM ENMQQPQIQN 120 NLEMVTYPSF NTNPALSMAS QQVGVGPIYT SDSVVSLPLD SNPNPVETYP KPMENEGEFC 180 PSWGTMTNEG LPVLDESIWA EAAMSLDFPM IPEVEIYPTG NLGDASLWDS MQTPWCM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 1e-47 | ERF family protein |