PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356907.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 273aa MW: 30069.6 Da PI: 7.4527

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356907.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.5	0.00022	94	116	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H XP_027356907.1 94 FSCNYCQRKFYSSQALGGHQNAH 116 89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
METLSHESPL SAEEAPPRPN TPLQVPHEKK QQSLEEEVEE KEAKLDTSLD LNAPGDDSAL 60 GCNPLLNLIT SLDMDLPNTS SENPTGSDVE PRVFSCNYCQ RKFYSSQALG GHQNAHKRER 120 SIAKRSQRSG SHMIASATPS GIPFLHNQIH HYATMASLPL HGACSDRPLG IQAHSMIQKP 180 APHSSFNGFR STYGNHGWSR PLIDQQPGIG KLTMETYHKT RSSSRGGVGK FDVVKNMLNS 240 AANEEINGYL VSGITRLKTN QEERKHLDLS LKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10970.1	4e-42	C2H2 family protein