PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356365.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 384aa MW: 41838.5 Da PI: 6.516

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356365.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.3	3.6e-10	258	306	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq XP_027356365.1 258 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 306 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MRFQHGNEGI LNCPISGLRT SVSEKTVNSV SMAMPSGVAN PFLASSAWDQ LVPLSQVQTF 60 RGSQVISPCE FANSSYPLVM ENQGMSSSSH LVQYISDSNF VDMVHKAPSY GSGSLSEIVG 120 SLSLPPSSDI ANIEYQPNQN PSHVGVIERS PINNEQSQGE GSTPEEGETG SAHGENRRKR 180 ELDNSSFNPN KNAEGYAIKD SSGKSSDGVK EQYEKKPRVE ENNSANLSGK QKKDKSDSGE 240 APKENFIHVR ARRGQATNSH SLAERVRREK ISERMRLLQE LVPGCNKITG KAVMLDEIIN 300 YVQSLQQQVE FLSMKLATVN PELSFEAERI LSKDVLQSHI GHVPIGGYGP AISCTHPFPS 360 GSFQGTLYSR PSTSTQFPPL PQDG

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MRFQHGNEGI LNCPISGLRT SVSEKTVNSV SMAMPSGVAN PFLASSAWDQ LVPLSQVQTF  60
RGSQVISPCE FANSSYPLVM ENQGMSSSSH LVQYISDSNF VDMVHKAPSY GSGSLSEIVG  120
SLSLPPSSDI ANIEYQPNQN PSHVGVIERS PINNEQSQGE GSTPEEGETG SAHGENRRKR  180
ELDNSSFNPN KNAEGYAIKD SSGKSSDGVK EQYEKKPRVE ENNSANLSGK QKKDKSDSGE  240
APKENFIHVR ARRGQATNSH SLAERVRREK ISERMRLLQE LVPGCNKITG KAVMLDEIIN  300
YVQSLQQQVE FLSMKLATVN PELSFEAERI LSKDVLQSHI GHVPIGGYGP AISCTHPFPS  360
GSFQGTLYSR PSTSTQFPPL PQDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	1e-60	bHLH family protein