PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356331.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 317aa MW: 35235.6 Da PI: 9.6525

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356331.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	48.2	2.7e-15	40	124	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ v +L+ a++ ++ +r+klk+++We+v++++ ++ ++++qCk+k e+++kry+ + +++ s++p++++l+ XP_027356331.1 40 EWSEGAVSTLLSAYEAKWVLRNRAKLKGHDWEDVARHVssraNCTKSPKTSTQCKNKVESMKKRYRSESASADH-----ASSWPLYSRLD 124 5***********************************85545555566678*************99997.....467**9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MEEKEETKED DNINNNEASS LPKEESVRKG FCGERVKRDE WSEGAVSTLL SAYEAKWVLR 60 NRAKLKGHDW EDVARHVSSR ANCTKSPKTS TQCKNKVESM KKRYRSESAS ADHASSWPLY 120 SRLDLLLRGT GPVTPVTAVP PPSQSPFDPS PPPLLSPPPP LAAASAPIAN AQNSPGSNGV 180 DKIPKEDGLA TKSCDDESNK NALDTDSSTP ALYSKKEELR SNKRKKKTVD NNGRRRKEYV 240 EIAKSLRWLA EAMVRSEQAR MDTVKEIERM RVEAEAKRGE MDLKRTEIIA NTQLEIARIF 300 ASVNKGSVDS SLRIGRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	223	237	KRKKKTVDNNGRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54390.1	1e-100	Trihelix family protein