PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356226.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

GRF

Protein Properties

Length: 325aa MW: 36074.6 Da PI: 6.9086

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356226.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.5	6.5e-25	81	125	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ XP_027356226.1 81 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVES 125 79****************************************986 PP
2	QLQ	63.9	4e-22	19	55	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FT +Q+q+L++Q+l++Ky++a++PvPp+L+++iqk XP_027356226.1 19 SPFTVSQWQELEHQALIFKYMVAGLPVPPDLVLPIQK 55 89*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MNSSGGGMMM GFSNSYSRSP FTVSQWQELE HQALIFKYMV AGLPVPPDLV LPIQKSFDSI 60 SPGFFHHPTL SYCSFYGKKV DPEPGRCRRT DGKKWRCSKE AYPDSKYCER HMHRGRNRSR 120 KPVESQTMTQ SSSTVTSLTV TGASSGTGSF QNLPTNAFGN LQGTDSGTDH SNYHLDSIPY 180 GIPNKEYRYL QGLKSEGGEH SIFSEASGSN KVLQMESQLE STWPLMSTSI ASFSTSKSSS 240 NSMLQSDYPQ HSFLSSEYGS GEHVKQEGQS LRPFFNEWPN SRESWSGLED ERSNQTAFST 300 TQLSISIPMS SSDFSATNSQ SPHDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	4e-46	GRF family protein