PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356145.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 292aa MW: 32912 Da PI: 7.9696

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356145.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.3	3.6e-20	136	190	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq +Le+ F++++++s ++++eLAkkl+L rqV vWFqNrRa+ k XP_027356145.1 136 RKKLRLTKEQSAVLEDSFKEHSTLSPKQKQELAKKLNLRARQVEVWFQNRRARTK 190 78889************************************************98 PP
2	HD-ZIP_I/II	121.2	5.4e-39	136	224	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq+++LE+sF+e+++L+p++K+ela++L+l++rqv+vWFqnrRARtk+kq+E+d+e Lk+++++l++en+rL+ke +eL++ XP_027356145.1 136 RKKLRLTKEQSAVLEDSFKEHSTLSPKQKQELAKKLNLRARQVEVWFQNRRARTKLKQTEVDCELLKKCCETLSDENKRLQKELQELKS 224 69*************************************************************************************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MGFDISNSGI RLGLGLGLHD QSSENCMKII DDEHKHIQSQ KKKEEDPCNK ASYPSLTLGP 60 SHDEANNQQI TKTESDEYYY IHIHPHASSP GAVSSFSNSS SIKRERDQFA GEELELEVEK 120 IPSRVVVDVD ENGKPRKKLR LTKEQSAVLE DSFKEHSTLS PKQKQELAKK LNLRARQVEV 180 WFQNRRARTK LKQTEVDCEL LKKCCETLSD ENKRLQKELQ ELKSMKTTQG HFYMQLPVAS 240 LTICPSCERI CGGNNGGINN GSSPTTALLI GPKPNQHFYK NNYTFTQSSA AC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	140	KPRKKLR
2	185	193	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	2e-63	HD-ZIP family protein