PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356050.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 392aa MW: 43126.4 Da PI: 6.7055

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356050.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.9	5e-10	201	248	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_027356050.1 201 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 248 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MLHCLNTSGN LAGGSSDMTV LERQKARMKW EQEQGSFFGT GFNAVFSSSS SSSSSLHVEN 60 SEAYPGAGIV LHKFDMAPAT APPAAGFDLS CAISRTFSCP PTLPEPKATH FSSIGKECFK 120 KRKTHNPKFV AENYKKDKKI KVGVEDGESK ITGQTKNNTT TTNSISNNRE TCADASNSNP 180 SEVQKPDYIH VRARRGQATD SHSLAERVRR EKISERMKYL QDLVPGCNKI TGKAGMLDEI 240 INYVQSLQRQ VEFLSMKLAT VNPRLGSNID DQCEKEVFLA CASTFPNTGM SFDITNSSYL 300 QFNSPQQIVS YGGLDMGINS SDIGLRRTIS APVSMPETFL DDSCFNQFLP SSTWEGDFHN 360 LYNLDFDQAP TTSFPSQLFT GLLEAGNLKM EM

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MLHCLNTSGN LAGGSSDMTV LERQKARMKW EQEQGSFFGT GFNAVFSSSS SSSSSLHVEN  60
SEAYPGAGIV LHKFDMAPAT APPAAGFDLS CAISRTFSCP PTLPEPKATH FSSIGKECFK  120
KRKTHNPKFV AENYKKDKKI KVGVEDGESK ITGQTKNNTT TTNSISNNRE TCADASNSNP  180
SEVQKPDYIH VRARRGQATD SHSLAERVRR EKISERMKYL QDLVPGCNKI TGKAGMLDEI  240
INYVQSLQRQ VEFLSMKLAT VNPRLGSNID DQCEKEVFLA CASTFPNTGM SFDITNSSYL  300
QFNSPQQIVS YGGLDMGINS SDIGLRRTIS APVSMPETFL DDSCFNQFLP SSTWEGDFHN  360
LYNLDFDQAP TTSFPSQLFT GLLEAGNLKM EM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	120	125	KKRKTH
2	120	139	KKRKTHNPKFVAENYKKDKK
3	121	126	KKRKTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	4e-57	bHLH family protein