PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027355987.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 447aa MW: 47276.5 Da PI: 9.1601

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027355987.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.2e-05	51	73	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_027355987.1 51 FVCEICNKGFQRDQNLQLHRRGH 73 89*******************88 PP
2	zf-C2H2	12.3	0.0005	128	149	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C+ C+k + +s+ k H++t+ XP_027355987.1 128 NCERCSKKYAVHSDWKAHMKTC 149 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MTDPPNPSPI THSSPQPLPP SKKKRSLPGM PDPDAQVIAL SPKTLLATNR FVCEICNKGF 60 QRDQNLQLHR RGHNLPWKLR QRGSKEIRKK AYVCPEPSCV HHNPSRALGD LTGIKKHFCR 120 KHGEKKWNCE RCSKKYAVHS DWKAHMKTCG TREYRCDCGT LFSRRDSFIT HRAFCDVLAK 180 ESARAHVQAQ VGASSPPTPP LTPSTTVVSP TLSIQSSEIP ENPTKMSPPS SNATCIVNGV 240 TGSTPSTSTC STVFASVLAS STTTATPIQS PSTSSFSNLM SSMAHPECPN SMSSMTEPTS 300 LSLSTPLYLS NNDPPLFTAS PQPALSATAL LQKAAQMGAS NASLLRGLGL AASFSVGKDD 360 SVGTPTIQWN GQVKQENHPV VDNLGLGLPC GNGGVMGPSS SFVGPPMTRD LLGLSIGDGA 420 SRGGLSALLT SFGGNFDSSG EGGGLGQ

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MTDPPNPSPI THSSPQPLPP SKKKRSLPGM PDPDAQVIAL SPKTLLATNR FVCEICNKGF  60
QRDQNLQLHR RGHNLPWKLR QRGSKEIRKK AYVCPEPSCV HHNPSRALGD LTGIKKHFCR  120
KHGEKKWNCE RCSKKYAVHS DWKAHMKTCG TREYRCDCGT LFSRRDSFIT HRAFCDVLAK  180
ESARAHVQAQ VGASSPPTPP LTPSTTVVSP TLSIQSSEIP ENPTKMSPPS SNATCIVNGV  240
TGSTPSTSTC STVFASVLAS STTTATPIQS PSTSSFSNLM SSMAHPECPN SMSSMTEPTS  300
LSLSTPLYLS NNDPPLFTAS PQPALSATAL LQKAAQMGAS NASLLRGLGL AASFSVGKDD  360
SVGTPTIQWN GQVKQENHPV VDNLGLGLPC GNGGVMGPSS SFVGPPMTRD LLGLSIGDGA  420
SRGGLSALLT SFGGNFDSSG EGGGLGQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	78	90	KLRQRGSKEIRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-106	C2H2 family protein