PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027355924.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C3H
Protein Properties Length: 373aa    MW: 41097.4 Da    PI: 7.7774
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027355924.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH32.51.4e-10323425
                    ---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH  4 elCrffartGtCkyGdrCkFaH 25
                     +Cr+f+r G CkyGdrC++ H
  XP_027355924.1  3 DICRNFQR-GSCKYGDRCRYLH 23
                    69******.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    
MRDICRNFQR GSCKYGDRCR YLHALQPQRK PNVHGFGGQG SSHQQQNSNP FGFGSHAASA  60
SHQQQKTNPF GFGSSQLNGV SHSESRPNQF KSFENKWNRQ SSKPQKSDNN SQPVNHQCTD  120
PDICKRQIAE DFEQEKPLWI LTCYSHCKGA PCDIIGDISY EELRAAAYED AKNGMSLQSI  180
VEKERNILKS KLVEFEKLLS EPYKMPLNSS LDSQKHQSVG VNANPFSNTS QNNGPLSVSS  240
FSQLGASLNM GFERPSAPLT NTLAQPSFLG SGGNSFTSNT ANLNISGIFS AQSSTYSRPV  300
ELTMFPGSTS TSQQTSIAFN NSGPTTMFQT TPDVQLLNKS QVENVSGDVS IWLKEKWNPG  360
EIPEEAPPDT LVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.13e-77C3H family protein