PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027355798.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 247aa MW: 27922.4 Da PI: 10.1318 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.6 | 0.0002 | 8 | 29 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C++C+k+Fs+ ++ H+r+H XP_027355798.1 8 VCKICNKCFSSGKSMGGHMRSH 29 6*******************99 PP | |||||||
2 | zf-C2H2 | 13.6 | 0.0002 | 189 | 211 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ Cgk+F + L Hi +H XP_027355798.1 189 FKCKRCGKTFQSYQALGGHIANH 211 89**********99999999988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MEKNNSRVCK ICNKCFSSGK SMGGHMRSHL AKLPIPPKPE TENQSLDNSA KSTHCSIQSA 60 SSLTSHPQRK TTQNFRSLKH NFLASLANSN RENESGSYPK NPTRKRSKCH RKFIAATKMK 120 AEPKQVNSSF ESLPVEEAAR SLLMLSKDKW PESKEIKTQK TKETNRMEAK DSKYGRDDSL 180 VQTQSQFRFK CKRCGKTFQS YQALGGHIAN HSKNEKLCQE VHQSGDERSG NNSDILDQNV 240 FECPYCS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60580.1 | 5e-21 | C2H2 family protein |