PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027355412.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | SRS | ||||||||
Protein Properties | Length: 196aa MW: 22002.8 Da PI: 8.2256 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 96.4 | 5.4e-30 | 11 | 72 | 4 | 65 |
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaa 65 ++++C+dCGnqakkdCa++RCRtCCk++gf+C+th++stW+p+++rr+r +q +++++ XP_027355412.1 11 KGSKCHDCGNQAKKDCAYSRCRTCCKNKGFECQTHIRSTWIPVDRRRHRVEQPPDIPKRHKQ 72 6789*********************************************9987766554444 PP | |||||||
2 | DUF702 | 77.5 | 3.6e-24 | 72 | 132 | 94 | 154 |
DUF702 94 aeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++s ++le ++P+ +ss+a+f+cvrv+s+dd +e+aYqt+v+igGhvf+G+LydqG+e+ XP_027355412.1 72 QSSYSSLEEFKFPAVMSSMALFSCVRVRSMDDTVNEIAYQTSVNIGGHVFSGLLYDQGPEQ 132 45556677778************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MSRTQQEEIV KGSKCHDCGN QAKKDCAYSR CRTCCKNKGF ECQTHIRSTW IPVDRRRHRV 60 EQPPDIPKRH KQSSYSSLEE FKFPAVMSSM ALFSCVRVRS MDDTVNEIAY QTSVNIGGHV 120 FSGLLYDQGP EQSFNARGDM DPLDQQHNLN LSSDGASATM APLSAPATHE LFLPPSHPFP 180 LASFRPGMTY LSHPKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G21400.1 | 1e-44 | SRS family protein |