PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027355262.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

GRF

Protein Properties

Length: 623aa MW: 68170.5 Da PI: 7.9902

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027355262.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.6	2.5e-24	220	264	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+++ ++k+CErH++rgr+rsrk++e XP_027355262.1 220 DPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEG 264 79****************************************985 PP
2	QLQ	60.1	6.5e-21	149	185	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l++Ky+ an+PvP++ l++i+k XP_027355262.1 149 GPFTPSQWMELEHQALIFKYITANVPVPSHFLVPIKK 185 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 623 aa Download sequence
MDLGAVGLNG LVGSDTTGFP PPLASDPQTK HKWYGSGFLN KQERSDTTEH DWSISKLPKT 60 THDDDISASR TMPFHHHNNL LRSNATLFSD AHHQPQMLSF SSQKSEPLLV EKPSPNATFP 120 YSFHPLSSYN KNTGYSSGNM HGILTGTRGP FTPSQWMELE HQALIFKYIT ANVPVPSHFL 180 VPIKKALESA GFYNFSSSLL RSNNAVGWGG FHLGFSNNTD PEPGRCRRTD GKKWRCSRDA 240 VVDQKYCERH MNRGRHRSRK PVEGQSGHAV TGTTPPTTTT TTNATSLTTM HSNNNTVIHR 300 STASNNLSIA QHQTKNMQPI ASDTSVPNNV NRIIMNNKEN GSERIPDTDA LPMLPAPLEL 360 KPKETPFVIH KQRVPYEESS RNEFGLVTSD SLLNPSQKNF TLLSRRSFGS SQNTSNQETD 420 SQHSLRQFID DWPKPKTQSH CSGVSWPELD MQSERTELSI SIPITSSDFM SSTSSPTNDK 480 VTLSPLRLSR ELYPIQMGLG VGNANAINES SNSSRQTNWI PIAWESSMGG PLGEVLNLSN 540 NNNASDHCVK NNSALNLMSD GWDNSPPIGS SPTGVLQKTA FGSLSNSSAG SSPRAENKTQ 600 EGASLCNDLL GSTLGNSSSL PAL

Sequence ? help Back to Top

Protein Sequence Length: 623 aa Download sequence

MDLGAVGLNG LVGSDTTGFP PPLASDPQTK HKWYGSGFLN KQERSDTTEH DWSISKLPKT  60
THDDDISASR TMPFHHHNNL LRSNATLFSD AHHQPQMLSF SSQKSEPLLV EKPSPNATFP  120
YSFHPLSSYN KNTGYSSGNM HGILTGTRGP FTPSQWMELE HQALIFKYIT ANVPVPSHFL  180
VPIKKALESA GFYNFSSSLL RSNNAVGWGG FHLGFSNNTD PEPGRCRRTD GKKWRCSRDA  240
VVDQKYCERH MNRGRHRSRK PVEGQSGHAV TGTTPPTTTT TTNATSLTTM HSNNNTVIHR  300
STASNNLSIA QHQTKNMQPI ASDTSVPNNV NRIIMNNKEN GSERIPDTDA LPMLPAPLEL  360
KPKETPFVIH KQRVPYEESS RNEFGLVTSD SLLNPSQKNF TLLSRRSFGS SQNTSNQETD  420
SQHSLRQFID DWPKPKTQSH CSGVSWPELD MQSERTELSI SIPITSSDFM SSTSSPTNDK  480
VTLSPLRLSR ELYPIQMGLG VGNANAINES SNSSRQTNWI PIAWESSMGG PLGEVLNLSN  540
NNNASDHCVK NNSALNLMSD GWDNSPPIGS SPTGVLQKTA FGSLSNSSAG SSPRAENKTQ  600
EGASLCNDLL GSTLGNSSSL PAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	3e-99	GRF family protein