PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027354765.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 236aa MW: 25048 Da PI: 8.2985 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.8 | 0.00017 | 89 | 111 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k Fs+ L H +H XP_027354765.1 89 YKCSVCNKAFSSYQALGGHKASH 111 9***********99999998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MALEALKSPT TPTPSFTPFE EPNLSYLEAP WAKRKRSKRP RMDPPCTEEE YLALCLIMLA 60 RGGAGGVSTA KPALSDNESA PLPAANLSYK CSVCNKAFSS YQALGGHKAS HRKFAGAAED 120 HSTSSAVTTS SASNGGGRSH ECSICHKSFP TGQALGGHKR CHYEGGGGGS SAVTASEGVG 180 STHTGSHSHH REFDLNLPAF PDFSTRFFAD DEVSSPLPSK KPRLNLTIPK IEIPQY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 4e-53 | C2H2 family protein |