PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027354711.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TALE

Protein Properties

Length: 424aa MW: 47325.6 Da PI: 6.4346

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027354711.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.4	9.9e-08	373	406	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + XP_027354711.1 373 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 406 469*****************************87 PP
2	ELK	28.8	2.8e-10	327	348	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ XP_027354711.1 327 ELKHELKQGYKEKIVDIREEIL 348 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MAYHNHHMSQ DLPLPHFTDQ QQHPHPDNTL LATSSDPTSK PPSDPHQTAP NWLNNALLRT 60 HFTENNNNHA NSASNNNGTN FLNLHTAASD PAANQSSGQW LARPVLHRNR SEVIDDVAGA 120 GESMMAGATV SHESADLKRG VEKSEAVAAE SGGEGLMNWQ NARHKAEILA HPLYEQLLSA 180 HVACLRIATP VDQLPRIDAQ LAQSQNVVAK YSAFGQGIVG DDKELDQFLS HYVLLLCSFK 240 EQLQQHVRVH AMEAVMACWE IEQSLQSLTG VSPGEGTGAT MSDDEEDQVD SDANLFDGAL 300 DGPDSMGFGP LIPTENERSL MERVRHELKH ELKQGYKEKI VDIREEILRK RRAGKLPGDT 360 TSVLKAWWQS HSKWPYPTEE DKARLVQETG LQLKQINNWF INQRKRNWHS NPSTSTVLKS 420 KRKR

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MAYHNHHMSQ DLPLPHFTDQ QQHPHPDNTL LATSSDPTSK PPSDPHQTAP NWLNNALLRT  60
HFTENNNNHA NSASNNNGTN FLNLHTAASD PAANQSSGQW LARPVLHRNR SEVIDDVAGA  120
GESMMAGATV SHESADLKRG VEKSEAVAAE SGGEGLMNWQ NARHKAEILA HPLYEQLLSA  180
HVACLRIATP VDQLPRIDAQ LAQSQNVVAK YSAFGQGIVG DDKELDQFLS HYVLLLCSFK  240
EQLQQHVRVH AMEAVMACWE IEQSLQSLTG VSPGEGTGAT MSDDEEDQVD SDANLFDGAL  300
DGPDSMGFGP LIPTENERSL MERVRHELKH ELKQGYKEKI VDIREEILRK RRAGKLPGDT  360
TSVLKAWWQS HSKWPYPTEE DKARLVQETG LQLKQINNWF INQRKRNWHS NPSTSTVLKS  420
KRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	404	424	RKRNWHSNPSTSTVLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	0.0	TALE family protein