PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353940.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C3H

Protein Properties

Length: 670aa MW: 74696.8 Da PI: 7.525

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353940.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	19	2.6e-06	119	138	5	24
--SGGGGTS--TTTTT-SS- CS zf-CCCH 5 lCrffartGtCkyGdrCkFa 24 +C+ff +G C+yG C+F+ XP_027353940.1 119 ECPFFKSGGSCPYGLACRFS 138 6******************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 670 aa Download sequence
MDEEESGKGV AEQTPEQMVA RAIAPVKKDF LRPPPVRASS PNDDVSIPND NKTSVLAKEK 60 KSKRQLKRER RQEQKSARNL CPEIAKTGDV NSCPYKDKCR FSHDLEGFKA QKPGDLEGEC 120 PFFKSGGSCP YGLACRFSST HHDGVPSANL NGLKKGSEVN GLSKDVQKLL WKNKMRFLKA 180 DTQLKSLSLS VPHRSKRNDL ESKDGDDSGS NKCIQSDDSG SCVVTSESGP KLECPAEAIK 240 DDDIDGNFKS DVLCPQKRRK TTENCGPHET ENEGVSVTEQ IVDIKSEQEA GTDAIAPEND 300 LSLKLHAREK KLIDFREKLY LAPLTTVGNL PFRRVCKVLG ADVTCGEMAM CTNLLQGQAS 360 EWALLRRHSS ENLFGVQICG AYPDTVARTV ELIEQECTID FIDINMGCPI DIVVNKGAGS 420 ALLTKPMRMK SIVEVASGTA DKPITVKVRT AYFEGKNRID SLIEDIGSWG VSAVTIHGRS 480 RQQRYSKLAD WDYVYQCARK APKMLQVVGN GDVFSFVDWN NHRTKCPELA TCMIARGALI 540 KPWIFTEIKE QRHWDISSGE RLNILKDFVN FGLEHWGSDT KGVETTRRFL LEWLSYTCRY 600 IPVGLLDVVP QRINWRPPSY HGRDELETLM ASDSAADWIR ISEMLLGKVP DGFTFAPKHK 660 SNAYDRAENG

Sequence ? help Back to Top

Protein Sequence Length: 670 aa Download sequence

MDEEESGKGV AEQTPEQMVA RAIAPVKKDF LRPPPVRASS PNDDVSIPND NKTSVLAKEK  60
KSKRQLKRER RQEQKSARNL CPEIAKTGDV NSCPYKDKCR FSHDLEGFKA QKPGDLEGEC  120
PFFKSGGSCP YGLACRFSST HHDGVPSANL NGLKKGSEVN GLSKDVQKLL WKNKMRFLKA  180
DTQLKSLSLS VPHRSKRNDL ESKDGDDSGS NKCIQSDDSG SCVVTSESGP KLECPAEAIK  240
DDDIDGNFKS DVLCPQKRRK TTENCGPHET ENEGVSVTEQ IVDIKSEQEA GTDAIAPEND  300
LSLKLHAREK KLIDFREKLY LAPLTTVGNL PFRRVCKVLG ADVTCGEMAM CTNLLQGQAS  360
EWALLRRHSS ENLFGVQICG AYPDTVARTV ELIEQECTID FIDINMGCPI DIVVNKGAGS  420
ALLTKPMRMK SIVEVASGTA DKPITVKVRT AYFEGKNRID SLIEDIGSWG VSAVTIHGRS  480
RQQRYSKLAD WDYVYQCARK APKMLQVVGN GDVFSFVDWN NHRTKCPELA TCMIARGALI  540
KPWIFTEIKE QRHWDISSGE RLNILKDFVN FGLEHWGSDT KGVETTRRFL LEWLSYTCRY  600
IPVGLLDVVP QRINWRPPSY HGRDELETLM ASDSAADWIR ISEMLLGKVP DGFTFAPKHK  660
SNAYDRAENG