PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353905.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 530aa MW: 59392 Da PI: 7.274

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353905.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.3	4.7e-10	476	524	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 ++W+ E++ l av ++G+g+Wk+I + + Rt+ ++k++w++ XP_027353905.1 476 KKWSVLEEQTLRTAVDKFGKGNWKLILNSHKdifEDRTEVDLKDKWRNM 524 68*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MDSEEDGGCW VLEFLLGNPL VESNLIKKVL WKITVPNADS RLKKTILLKT LQHYLSTVSI 60 AESILQTLEI LEELLRLEGS PITAAMSAAY CAVAVECTLK YLQLELNDNP AYHGAVERIW 120 RGRVRWMDPS MNASREGSLL FSAELKRWRN DIEASLLDSR LRERLASSRT RRNAVRKLKV 180 YLAEAMQNLG PSFLEVAASM PANNGRIDAV ESMRAEDDGI DAETRRACSG THELTHPKRV 240 SPVEIQRDNK LFEAKGTSVA AEEAGPSTSR CKNDSVPKGA CVATHVNHEL THQERVAVSP 300 VEILKDNKLS EAKDTGTGAE EVSPSTTCSK VDSATNCEVQ KAGESHEVED PILNSLHMSG 360 NARAELAKKD MNQEPPIENQ SRDADVSFPR TGQRINNNDD NLNEGTSVPQ KGDQRPSLME 420 KNNTACTYEW NDAIDGLQGG TSNPESRFHF PSPKRRKLSP LKKYEPANIT RRRKPKKWSV 480 LEEQTLRTAV DKFGKGNWKL ILNSHKDIFE DRTEVDLKDK WRNMMRYGCK

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MDSEEDGGCW VLEFLLGNPL VESNLIKKVL WKITVPNADS RLKKTILLKT LQHYLSTVSI  60
AESILQTLEI LEELLRLEGS PITAAMSAAY CAVAVECTLK YLQLELNDNP AYHGAVERIW  120
RGRVRWMDPS MNASREGSLL FSAELKRWRN DIEASLLDSR LRERLASSRT RRNAVRKLKV  180
YLAEAMQNLG PSFLEVAASM PANNGRIDAV ESMRAEDDGI DAETRRACSG THELTHPKRV  240
SPVEIQRDNK LFEAKGTSVA AEEAGPSTSR CKNDSVPKGA CVATHVNHEL THQERVAVSP  300
VEILKDNKLS EAKDTGTGAE EVSPSTTCSK VDSATNCEVQ KAGESHEVED PILNSLHMSG  360
NARAELAKKD MNQEPPIENQ SRDADVSFPR TGQRINNNDD NLNEGTSVPQ KGDQRPSLME  420
KNNTACTYEW NDAIDGLQGG TSNPESRFHF PSPKRRKLSP LKKYEPANIT RRRKPKKWSV  480
LEEQTLRTAV DKFGKGNWKL ILNSHKDIFE DRTEVDLKDK WRNMMRYGCK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	454	474	KRRKLSPLKKYEPANITRRRK
2	454	477	KRRKLSPLKKYEPANITRRRKPKK
3	455	475	KRRKLSPLKKYEPANITRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	4e-13	MYB_related family protein