PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353595.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

GRF

Protein Properties

Length: 378aa MW: 41205.9 Da PI: 7.4805

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353595.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	82.2	4.5e-26	140	183	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e XP_027353595.1 140 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVE 183 79***************************************987 PP
2	QLQ	52.5	1.5e-18	70	106	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+F+ aQ+q+L+ Q+l+++y++a++ vPpeLlq+i+k XP_027353595.1 70 SYFSLAQWQELELQALIFRYMLAGAAVPPELLQPIKK 106 79*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MDFHLKQWRN QHESEEQHST KMPKLLPESH QHPQSSASAL PLFVPESNSK VSTLSDSTLA 60 TTNRFPRMGS YFSLAQWQEL ELQALIFRYM LAGAAVPPEL LQPIKKSLLH SPPFFLHHPL 120 QHYQPPSVLP SGYWGRAAMD PEPGRCRRTD GKKWRCSRDV VAGQKYCERH MHRGRNRSRK 180 PVELPTPASA CGGGGSLGGA SSLSSPPLAT ASLKSPFDLL HLNERSSGTK NEDKSLFDNE 240 DHVGGDGRSG GHMLRHFFDD WPRSLQESDN AENNAGRLNS ATCLSISMPG NTSSDVSLKL 300 STGYAEDPGP TNETGDLQAQ AEQLQLNWAG GWAASSQVAS MGGPLAEALR SSTSTSSPTS 360 VLHQLPRGSV SETSFIST

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MDFHLKQWRN QHESEEQHST KMPKLLPESH QHPQSSASAL PLFVPESNSK VSTLSDSTLA  60
TTNRFPRMGS YFSLAQWQEL ELQALIFRYM LAGAAVPPEL LQPIKKSLLH SPPFFLHHPL  120
QHYQPPSVLP SGYWGRAAMD PEPGRCRRTD GKKWRCSRDV VAGQKYCERH MHRGRNRSRK  180
PVELPTPASA CGGGGSLGGA SSLSSPPLAT ASLKSPFDLL HLNERSSGTK NEDKSLFDNE  240
DHVGGDGRSG GHMLRHFFDD WPRSLQESDN AENNAGRLNS ATCLSISMPG NTSSDVSLKL  300
STGYAEDPGP TNETGDLQAQ AEQLQLNWAG GWAASSQVAS MGGPLAEALR SSTSTSSPTS  360
VLHQLPRGSV SETSFIST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	1e-76	GRF family protein