PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353533.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 976aa MW: 107969 Da PI: 6.1151

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353533.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.4	3.2e-41	148	225	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C +dls+ak+yhrrhkvCe+hska+++lv + +qrfCqqCsrfh+l+efDe+krsCrrrLa+hn+rrrk+++ XP_027353533.1 148 ICQVEDCGTDLSNAKDYHRRHKVCEMHSKASKALVGNAMQRFCQQCSRFHMLQEFDEGKRSCRRRLAGHNKRRRKTNQ 225 5**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 976 aa Download sequence
MEARFGAEAF HLYGSSDLRG VGKRTVEWDL NEWKWDGDLF VARPLSPVPE HRQFFPVPGG 60 SSNSNSSSSC SDDVDLGIRR GNKEGERKRR VVVVEDETGL NEEAGSLSLK IGGGRGVGGS 120 TVATQIASWE GTNGKKSRVA GGTSNRAICQ VEDCGTDLSN AKDYHRRHKV CEMHSKASKA 180 LVGNAMQRFC QQCSRFHMLQ EFDEGKRSCR RRLAGHNKRR RKTNQADRSD QNTDQDLLTH 240 LLKSLASQNG EQGSKNLSKL LREPENLLKE GRSSGKSEVV STLFSNGSQG SPTTTKQNQS 300 VSISEIQHQV MHAHDARAAD QQTVSSTKPS VSNSPPAYSE ARDSTAGQTK MNNFDLNDIY 360 VDSDDGIEDI ERLPVSGNLG TTSSLDYPWM QQDSHQSSPP QTSGNSDSAS AQSPSSSSGE 420 AQSRTDRIVF KLFGKEPNDF PLVLRAQILD WLSHSPTDIE GYIRPGCIVL TIYLRQAEAV 480 WEELCYDLAS SLNRLLDVSD DDFWRTGWVH IRVQHQIAFI FNGQVVIDAS LPSRSNYSKI 540 LSVSPIAVPA SKTAQFSVKG INLIRPATRL LCAIEGSYLV CEDACESMDQ CSKDLDELEC 600 IQFSCSVPVM NGRGFIEIED QGLSSSFFPF IVVEEDVCSE ICVLEPLLEL SDTDPDIEGD 660 GRIKARNQAM DFIHEMGWLL HRSQMKSRMV HLNSGADLFP LNRFKWLMEF SVDHDWCAVV 720 KKLLNLLFDG TVSTGDHPSL YLALSELGVL HRAVRRNSRQ LVELLLRFVP ENISDKLGAE 780 DTVLVDEENQ SFLFTPDVIG PAGLTPLHIA AGKDGSEDVL DALTNDPCMV GIEAWKSARD 840 STGSTPEDYA RLRGHYTYIH LVQKKINKKQ GGTHVVVEIP SNLTGFSTNQ KQNESSTSFE 900 IGKTDVKYVQ KHCKLCDHKL SCRTAVGKSL VYKPAMLSMV AIAAVCVCVA LLFKSSPEVL 960 YVFRPFRWES LEFGTS

Sequence ? help Back to Top

Protein Sequence Length: 976 aa Download sequence

MEARFGAEAF HLYGSSDLRG VGKRTVEWDL NEWKWDGDLF VARPLSPVPE HRQFFPVPGG  60
SSNSNSSSSC SDDVDLGIRR GNKEGERKRR VVVVEDETGL NEEAGSLSLK IGGGRGVGGS  120
TVATQIASWE GTNGKKSRVA GGTSNRAICQ VEDCGTDLSN AKDYHRRHKV CEMHSKASKA  180
LVGNAMQRFC QQCSRFHMLQ EFDEGKRSCR RRLAGHNKRR RKTNQADRSD QNTDQDLLTH  240
LLKSLASQNG EQGSKNLSKL LREPENLLKE GRSSGKSEVV STLFSNGSQG SPTTTKQNQS  300
VSISEIQHQV MHAHDARAAD QQTVSSTKPS VSNSPPAYSE ARDSTAGQTK MNNFDLNDIY  360
VDSDDGIEDI ERLPVSGNLG TTSSLDYPWM QQDSHQSSPP QTSGNSDSAS AQSPSSSSGE  420
AQSRTDRIVF KLFGKEPNDF PLVLRAQILD WLSHSPTDIE GYIRPGCIVL TIYLRQAEAV  480
WEELCYDLAS SLNRLLDVSD DDFWRTGWVH IRVQHQIAFI FNGQVVIDAS LPSRSNYSKI  540
LSVSPIAVPA SKTAQFSVKG INLIRPATRL LCAIEGSYLV CEDACESMDQ CSKDLDELEC  600
IQFSCSVPVM NGRGFIEIED QGLSSSFFPF IVVEEDVCSE ICVLEPLLEL SDTDPDIEGD  660
GRIKARNQAM DFIHEMGWLL HRSQMKSRMV HLNSGADLFP LNRFKWLMEF SVDHDWCAVV  720
KKLLNLLFDG TVSTGDHPSL YLALSELGVL HRAVRRNSRQ LVELLLRFVP ENISDKLGAE  780
DTVLVDEENQ SFLFTPDVIG PAGLTPLHIA AGKDGSEDVL DALTNDPCMV GIEAWKSARD  840
STGSTPEDYA RLRGHYTYIH LVQKKINKKQ GGTHVVVEIP SNLTGFSTNQ KQNESSTSFE  900
IGKTDVKYVQ KHCKLCDHKL SCRTAVGKSL VYKPAMLSMV AIAAVCVCVA LLFKSSPEVL  960
YVFRPFRWES LEFGTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein