PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353406.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 339aa MW: 38112 Da PI: 6.0238

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353406.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.9	4.1e-09	170	214	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h ++Er+RR+++ ++ L +P + kK +Ka +L++Av+Y k+L XP_027353406.1 170 HIIAERKRRQELTGSIIALSATIPGL-----KKTDKAYVLREAVNYTKQL 214 899*********************.....9************9999 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MEDSLRDWVS QLEMEEQDML NNQSFSSFDE QEFLREILQH PENFSPEWEQ YPSPCCTIQN 60 NNISVEGGAT SPTNSTLSFD ETSLCGNDGT LHKSNSSNSI KSLERCVCSP AAYLLSFDKS 120 TAEPIIHHSP KLNSAFGSNK RAVVKDGSEL ESRVGQTRKK VRGSSETHDH IIAERKRRQE 180 LTGSIIALSA TIPGLKKTDK AYVLREAVNY TKQLKERIKE LENQNKDKRV DSTIFIKKSQ 240 ASSDKSIGKC EKNTESLFEV EARVLEKEVL IGIHCEKQKD IVFKIHVLLE KLHLSITSSS 300 ALPFGTSTLI IHVIAQMGDE YSMTMDDLVK NLRESLLEA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	158	178	RKKVRGSSETHDHIIAERKRR
2	174	179	ERKRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-43	bHLH family protein