PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027353276.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 179aa    MW: 20727.3 Da    PI: 8.3496
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027353276.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.16.5e-054264123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ Fs+   L  H++ H
  XP_027353276.1 42 YSCNFCKRGFSNAQALGGHMNIH 64
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MSYFYFPFTC QKKMDFNTQN SNKSEIRWNS DDQGGHGQVK SYSCNFCKRG FSNAQALGGH  60
MNIHRRDRAK LKQSCEENLL SLDISIKTTI DHNDPVNLEE KILFGLDSGE EKHARNHKKP  120
FTFPNKDDHA HQRAMLEIPH IPSFVLGQRI EEKKADLDLE LRLGIEPQKS PTFNTRAFF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16573RRDRAKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.14e-18C2H2 family protein