PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027353153.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 278aa    MW: 30805.5 Da    PI: 8.326
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027353153.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.00016183205123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg  Fs+   L  H+r+H
  XP_027353153.1 183 HECSICGAEFSSGQALGGHMRRH 205
                     78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MQEQQEHVVC KDHMQIIMKG KRTKRQRVPS PLRLTMSTCS SVGRSSTDNS IGFDLTTTSN  60
EFRNRTEEEE DMANCLILLA QGGHHHHHHH TPKPSQHVAS RDHNSNEAGL YLYECKTCNR  120
CFPSFQALGG HRSASHKKPK PNTEVGHDGC DPTCTTLSLQ VSTNNKALYN SCSKTISTKS  180
KVHECSICGA EFSSGQALGG HMRRHRNLVS TSTTISMSGA IANNGGKIQE AKKHKDVLDL  240
DLNLPAPEDD HRESKLFPFQ SKEKVIGFSA TSLVDCHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.12e-56C2H2 family protein