PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027352977.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB_related | ||||||||
Protein Properties | Length: 92aa MW: 10427.7 Da PI: 8.8874 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.8 | 5.1e-08 | 10 | 55 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 g+W+ + + + +a + + ++ +W +a+ +g g+t++++k ++ XP_027352977.1 10 GSWSVKDNKAFEKALAVYDKDtpdRWYNVAHAVG-GKTPEEVKRHYE 55 79********************************.**********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 92 aa Download sequence |
MASTSMSASG SWSVKDNKAF EKALAVYDKD TPDRWYNVAH AVGGKTPEEV KRHYELLVQD 60 VKHIESGQVP FPNYKKTAGS EEEKRMRNLN LQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 1e-38 | MYB_related family protein |