PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027352886.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 159aa MW: 17737.6 Da PI: 9.8038 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.7 | 0.00081 | 31 | 53 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs+ L H +H XP_027352886.1 31 FECKTCNRKFSSFQALGGHRASH 53 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 12.3 | 0.00052 | 80 | 102 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs L H+r+H XP_027352886.1 80 HECSICGLGFSLGQALGGHMRKH 102 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MKRQRDNCLM LLCSPQESNK AQEKSFGSVE FECKTCNRKF SSFQALGGHR ASHKRPKLEG 60 GEELKEEAKS LSLWNKPKMH ECSICGLGFS LGQALGGHMR KHRGAINEGF SSINQVIAKI 120 PVLKRSNSTR VMCLDLNLTP LENDLMFGMK SPPVPLSLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37430.1 | 1e-38 | C2H2 family protein |