PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027352743.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 459aa MW: 50692 Da PI: 6.7019

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027352743.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.6	5.6e-17	125	174	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_027352743.1 125 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 174 78*****************......55**********************997 PP
2	AP2	41.7	2.9e-13	217	267	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g XP_027352743.1 217 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSELEAARAYDRAAIKCNG 267 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MLDLNLNASS DYTNTPPLSA TPMESSGSLN SSVVNAADTE DSCSYGDGAV AYNFAILNSN 60 TAAADDAAVR TIQLFPASDS GISPGWLDFS SSKEVDHHGA PPEQVITPRQ PQVKKSRRGP 120 RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV YLGGFDTAHA AARAYDRAAI KFRGVDADIN 180 FNVSDYDEDI KQMSNFTKEE FVHILRRQST GFSRGSSKYR GVTLHKCGRW EARMGQFLGK 240 KYIYLGLFDS ELEAARAYDR AAIKCNGREA VTNFEPSLYE GEVISQSDNE DNRRSLDLNL 300 GIAPPSYSDG QIKNTPNNGS CLPVQRSWDD IPLDKRIMFE HSGSRSLNVQ PSHGYSIASE 360 HHPSVWSGTN FFPVYEERAT EKRMETAPVP NWAWQVQGPY GGAALTPPFS AAASSGFPST 420 MIPSAADSQI HFPNVTFLHS HFPPSITNST TISPFYCRS

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MLDLNLNASS DYTNTPPLSA TPMESSGSLN SSVVNAADTE DSCSYGDGAV AYNFAILNSN  60
TAAADDAAVR TIQLFPASDS GISPGWLDFS SSKEVDHHGA PPEQVITPRQ PQVKKSRRGP  120
RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV YLGGFDTAHA AARAYDRAAI KFRGVDADIN  180
FNVSDYDEDI KQMSNFTKEE FVHILRRQST GFSRGSSKYR GVTLHKCGRW EARMGQFLGK  240
KYIYLGLFDS ELEAARAYDR AAIKCNGREA VTNFEPSLYE GEVISQSDNE DNRRSLDLNL  300
GIAPPSYSDG QIKNTPNNGS CLPVQRSWDD IPLDKRIMFE HSGSRSLNVQ PSHGYSIASE  360
HHPSVWSGTN FFPVYEERAT EKRMETAPVP NWAWQVQGPY GGAALTPPFS AAASSGFPST  420
MIPSAADSQI HFPNVTFLHS HFPPSITNST TISPFYCRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-111	AP2 family protein