PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027352691.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 251aa MW: 28636.5 Da PI: 9.8005 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12 | 0.00063 | 94 | 116 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C++++++ +L H + H XP_027352691.1 94 SCSVCSRVYPTTRLLSIHVSEvH 116 6*****************99877 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 251 aa Download sequence |
MEVEQNQNLQ LGFPFWKPIR RRFGPDSPFF ATGNLERELL AKQVALQLTE EKQQLENWIQ 60 EEGREVFCPI VGCGARLTSM EDFENHYNAR HTASCSVCSR VYPTTRLLSI HVSEVHDSFF 120 QAKVARGYDV YECLVEGCGL KFKSYNSRQQ HLVDKHKFPI SFEFFKKSRP SKKQRSKSQR 180 KQTVRKEDAS GMMEVENAAM DDLVLAVSKL STSDSIPSSI SFGRRHKGLS FVPRAVQRGN 240 GSNSSASMTK R |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 172 | 178 | KKQRSKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G14140.1 | 3e-98 | C2H2 family protein |