PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027352443.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 296aa    MW: 33085.4 Da    PI: 7.789
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027352443.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox551.4e-17141195256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ +++keq   Le+ F+++ +++ +++  LAk+l+L  rqV vWFqNrRa+ k
  XP_027352443.1 141 RKKLRLSKEQSAFLEDSFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 195
                     778899***********************************************98 PP
2HD-ZIP_I/II127.65.3e-41141231192
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                     +kk+rlskeq+++LE+sF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk
  XP_027352443.1 141 RKKLRLSKEQSAFLEDSFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKELQELR-ALK 231
                     69*************************************************************************************9.555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MELALSLGDT PKPFSLATKL PSIALEDERK GSSDPPLQLH LLPSTPVPPS QPSSHFPIPW  60
LMHALSTERA TSEVPTRVLD VNRFQSPPVD DTDDGAALSS PNSAVSSFPM DFCIRNSNAD  120
AARNTEGADR TSDDEENGST RKKLRLSKEQ SAFLEDSFKE HTTLNPKQKL ALAKQLNLRP  180
RQVEVWFQNR RARTKLKQTE VDCEYLKRCC ESLTEENRRL QKELQELRAL KTSQPFYMQL  240
PATTLTMCPS CERVATNNNN ASRIPATLCH TKPRILPLSN AQAQPQEAQM AHQIAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1140146TRKKLRL
2190198RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.18e-74HD-ZIP family protein