PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027351984.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 264aa MW: 30092.5 Da PI: 6.2362 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57 | 4.3e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l+++++ +G +W++ +++ g+ R++k+c++rw +yl XP_027351984.1 14 RGPWTPEEDQILINYINTYGHSNWRALPKHAGLLRCGKSCRLRWTNYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.9 | 7.3e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l XP_027351984.1 67 RGNITKEEEDAIINLHEMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 7999******************.*********.************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 264 aa Download sequence |
MGRAPCCAKM GLKRGPWTPE EDQILINYIN TYGHSNWRAL PKHAGLLRCG KSCRLRWTNY 60 LRPDIKRGNI TKEEEDAIIN LHEMLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLPPNQ 120 ESHHPKRNKK QQTLDTVDAK QQQRHPSKTP KEENTKDTPL SPPQCSSDNN STITNTTTNH 180 GMSVNININD ADSPQNNLAL DEDFWSEVLS SDNSGETSDF PTIGADCDQI QLPFSPLSSM 240 CDDDMNFWYD VYARAEELNE ILEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G31180.1 | 2e-83 | MYB family protein |