PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027351698.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 629aa MW: 69522.1 Da PI: 8.1748

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027351698.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.3	3e-23	136	237	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ ++ + + +d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF + + XP_027351698.1 136 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--NILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFL--RAE 226 89**************************997656666..69999****************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_027351698.1 227 NGDLCVGIRRA 237 8999**997 PP
2	Auxin_resp	108.3	8e-36	305	387	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++FevvY+Prast+eF+vk++ v+++ ++++++GmRfkm fetedss++++ +Gt+++v+ +dp rWp+S+Wr+L+ XP_027351698.1 305 AATLAANMQPFEVVYYPRASTPEFCVKASLVRSTSQIRWCPGMRFKMPFETEDSSRISWfMGTISSVQVADP-RWPDSPWRLLQ 387 68899*****************************************************************.*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 629 aa Download sequence
MLFQEFEVKK KYYLAPTKVM ESKEKLKEVE KCLDPQLWHA CAGGMVQMPL VNAKVFYFPQ 60 GHAEHACGPV DFRAGSKIPP FIQCRVAAIK YMADPETDEV YAKLSLVPMN NNEADFEDDG 120 VGGINGSETK DKPPSFAKTL TQSDANNGGG FSVPRYCAET IFPRLDYSAD PPVQNILAKD 180 VHGETWKFRH IYRGTPRRHL LTTGWSTFVN HKKLVAGDSI VFLRAENGDL CVGIRRAKKG 240 IGGGPETSSG WNSVGGICPL PYGGFSSFLK DEDNQFMRNG NSNVLSPSAN LMGKGKVRPE 300 AVIEAATLAA NMQPFEVVYY PRASTPEFCV KASLVRSTSQ IRWCPGMRFK MPFETEDSSR 360 ISWFMGTISS VQVADPRWPD SPWRLLQVTW DEPELLQNVK RVSPWLVEIV SNMPSILSPF 420 SPPRKKLRFP QPPDFPLDGQ ISMPTFPSNF LGPNNPFGFL PESTPAGMQG ARHAISYGIS 480 LSNLHHNKHT GLFQAGFPPL DHAASPMRVS NNPPLLKAST NENVSCLLSM ENSTQSSKKV 540 DGFKAPHLML FGQKILTEHQ ISLRNSTRTV SPVITSSSDG NADKVTNFSN GSCSALHPQL 600 SSCEGFRWFM DHHKETSLET VTSLEQQGG

Sequence ? help Back to Top

Protein Sequence Length: 629 aa Download sequence

MLFQEFEVKK KYYLAPTKVM ESKEKLKEVE KCLDPQLWHA CAGGMVQMPL VNAKVFYFPQ  60
GHAEHACGPV DFRAGSKIPP FIQCRVAAIK YMADPETDEV YAKLSLVPMN NNEADFEDDG  120
VGGINGSETK DKPPSFAKTL TQSDANNGGG FSVPRYCAET IFPRLDYSAD PPVQNILAKD  180
VHGETWKFRH IYRGTPRRHL LTTGWSTFVN HKKLVAGDSI VFLRAENGDL CVGIRRAKKG  240
IGGGPETSSG WNSVGGICPL PYGGFSSFLK DEDNQFMRNG NSNVLSPSAN LMGKGKVRPE  300
AVIEAATLAA NMQPFEVVYY PRASTPEFCV KASLVRSTSQ IRWCPGMRFK MPFETEDSSR  360
ISWFMGTISS VQVADPRWPD SPWRLLQVTW DEPELLQNVK RVSPWLVEIV SNMPSILSPF  420
SPPRKKLRFP QPPDFPLDGQ ISMPTFPSNF LGPNNPFGFL PESTPAGMQG ARHAISYGIS  480
LSNLHHNKHT GLFQAGFPPL DHAASPMRVS NNPPLLKAST NENVSCLLSM ENSTQSSKKV  540
DGFKAPHLML FGQKILTEHQ ISLRNSTRTV SPVITSSSDG NADKVTNFSN GSCSALHPQL  600
SSCEGFRWFM DHHKETSLET VTSLEQQGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein