PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027351669.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 310aa MW: 34785.3 Da PI: 9.5692 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 39.5 | 1.3e-12 | 38 | 81 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r +WT +E++++++a +++ + Wk+I + +g +t q++s+ qk XP_027351669.1 38 RENWTDQEHDKFLEALHLFDRD-WKKIEAFVG-SKTVIQIRSHAQK 81 789*****************77.*********.**********998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 310 aa Download sequence |
MVSLNPNPPQ PFHFFDPIIN MEDPNKKIRK PYTITKSREN WTDQEHDKFL EALHLFDRDW 60 KKIEAFVGSK TVIQIRSHAQ KKYFLKVQKN GTSEHVPPPR PKRKAAHPYP QKASKNAPTI 120 SQVTGPLQSS SALSESSYIY RPDSSSVLRT PVSSVSLPSW GYNVTPPVNL PQVTKDDMVL 180 NQQTIPLNYC CSSSNESTPR TRPSSKQTNQ GDQGKLIKVM PDFAQVYSFI GSVFDPNATN 240 HLQTLKQMDP INVETVLLLM RNLSTNLTSP EFENDRKLLS SYNANSEKAN SGSHCSQPLT 300 DISESAILSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G52660.2 | 3e-88 | MYB_related family protein |