PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027351467.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | bHLH | ||||||||
Protein Properties | Length: 108aa MW: 12140.2 Da PI: 9.7405 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.3 | 0.00033 | 2 | 41 | 11 | 55 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 rR +++ ++ L++l+ + +K + a++L +A YIk Lq XP_027351467.1 2 RRNQKLSDKVTILQKLVSPF-----GKTDTASVLHEASLYIKLLQ 41 78889999999999999998.....8****************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 108 aa Download sequence |
MRRNQKLSDK VTILQKLVSP FGKTDTASVL HEASLYIKLL QAQIQTLFQM LSFSYTSTTK 60 VPHMQDCGDK LLVDLRSRGL CLVPISITQT VTMEDQIHHA SASRIILP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21340.1 | 4e-21 | bHLH family protein |