PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027351406.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 387aa MW: 43630.3 Da PI: 7.3633

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027351406.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37	8.2e-12	66	122	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s+n k+k + g ++ +e Aa+a++ a++k++g XP_027351406.1 66 SKFRGVSRHRWTGRFEAHLWDkLSWNItqKKKGKQ-GAYDEEESAARAYDLAALKYWG 122 79*****************88887784446666.9*****************98 PP
2	AP2	52.4	1.3e-16	165	216	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g XP_027351406.1 165 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 216 89**99******99966...3.6***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MATMKENEVN LGKSRMSMAE GEFQVARCVK RRRREAAAEN SGDHNHQQQL PQVGENSTIN 60 TTKRSSKFRG VSRHRWTGRF EAHLWDKLSW NITQKKKGKQ GAYDEEESAA RAYDLAALKY 120 WGTSTFTNFP ISDYEKEVEI MQTMTKEEYL ATLRRKSSGF SRGVSKYRGV ARHHHNGRWE 180 ARIGRVFGNK YLYLGTYSTQ EEAARAYDIA AIEYRGIHAV TNFDLSTYIK WLKPAGTSTT 240 ETKLESQAAL ESQTVASPSN YAPIEESKSL TLHTSFFSPD TINSPVKQEN FGNNAYQFSS 300 NKSSSPTALG LLLRSSLFRE LVEKNSNVGG VSGDEADGEV TKDQQAQLAS DDDLGGIFYD 360 SIGDIPFVCD PNRYNLELEE RDLHSIF

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MATMKENEVN LGKSRMSMAE GEFQVARCVK RRRREAAAEN SGDHNHQQQL PQVGENSTIN  60
TTKRSSKFRG VSRHRWTGRF EAHLWDKLSW NITQKKKGKQ GAYDEEESAA RAYDLAALKY  120
WGTSTFTNFP ISDYEKEVEI MQTMTKEEYL ATLRRKSSGF SRGVSKYRGV ARHHHNGRWE  180
ARIGRVFGNK YLYLGTYSTQ EEAARAYDIA AIEYRGIHAV TNFDLSTYIK WLKPAGTSTT  240
ETKLESQAAL ESQTVASPSN YAPIEESKSL TLHTSFFSPD TINSPVKQEN FGNNAYQFSS  300
NKSSSPTALG LLLRSSLFRE LVEKNSNVGG VSGDEADGEV TKDQQAQLAS DDDLGGIFYD  360
SIGDIPFVCD PNRYNLELEE RDLHSIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	2e-91	AP2 family protein