PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027351034.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | LBD | ||||||||
Protein Properties | Length: 170aa MW: 19347.2 Da PI: 5.6772 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 125.5 | 2.5e-39 | 14 | 111 | 1 | 98 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaC++lrr+C ++C lapyfp ++ +kf vh++FGasnv+k+++ ++e++reda++s+vyeA ar+rdPvyG++g i +lq+ +++lka+l+ XP_027351034.1 14 PCAACRMLRRRCDSKCLLAPYFPTDEIEKFVGVHRVFGASNVIKMIQMVEETKREDAVKSMVYEATARLRDPVYGSAGAIYQLQKMIQELKAQLE 108 7*********************************************************************************************9 PP DUF260 96 llk 98 +++ XP_027351034.1 109 SIN 111 876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MGFHAEAKAR IHQPCAACRM LRRRCDSKCL LAPYFPTDEI EKFVGVHRVF GASNVIKMIQ 60 MVEETKREDA VKSMVYEATA RLRDPVYGSA GAIYQLQKMI QELKAQLESI NTRVSELREQ 120 KDQLLSISNN NAQGHLDPLS LEFDCSMVLD PFEFPVEGDW VYSIDNVNTC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28500.1 | 1e-45 | LBD family protein |