PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350984.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 663aa MW: 73664 Da PI: 5.9279

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350984.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.8	2.1e-23	80	180	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f k+lt sd++++g +++ +++a+e+ + +++ +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD +vF + +++ XP_027350984.1 80 FSKILTASDTSTHGGFSVLRRHATEClpqldMTQTTPTQELVAKDLHGFEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFL--RGEDG 172 889************************99555556679*********************************************..4499 PP ..EEEEE- CS B3 91 elvvkvfr 98 el+v+v+r XP_027350984.1 173 ELRVGVRR 180 ******98 PP
2	Auxin_resp	104.1	1.7e-34	206	285	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+ t+++F v+Y+Pr+ s+F++ v+k+++a+++k+svGmRfkm+fe eds+err+sGt+vgv d++p WpnS+WrsLk XP_027350984.1 206 ASHAVLTSTMFVVYYKPRT--SQFIIGVNKYLDAINNKFSVGMRFKMRFEVEDSPERRFSGTIVGVGDVSP-GWPNSPWRSLK 285 689999**********6..9*********************************************.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 663 aa Download sequence
MEQLQASTNQ ELNQELSQQI PLFNLPSKIL CRVVHIQLLA EQETDEVYAR ITLLPEANQN 60 EPTSPDPSVP ETQKQTFHYF SKILTASDTS THGGFSVLRR HATECLPQLD MTQTTPTQEL 120 VAKDLHGFEW KFKHIFRGQP RRHLLTTGWS TFVTSKRLVA GDAFVFLRGE DGELRVGVRR 180 LARQQSPMPS SVISSQSMHL GVLATASHAV LTSTMFVVYY KPRTSQFIIG VNKYLDAINN 240 KFSVGMRFKM RFEVEDSPER RFSGTIVGVG DVSPGWPNSP WRSLKVQWDE PAIIPRPEMV 300 SPWEIEPFGA STALNVAQPA VKSKRSRPAE VSSEIAPNSL APAFWYHGPS LSHDPTQLGS 360 AAENQSNENP VVWSSRQKEI NGNPVNANSS SSKVRAEGMW SSSPHLNASC NFFPDPKNNK 420 AVATQLSVSG SYPPVSSERN DDLAHDPVES GKKTENPMDC WVFGVNLTNN FTNVTLPEKE 480 IGCPAIIPSG PKDSIAVAAC ETEAAQNPNY SLSNKEQMQV ISDASPNEKQ TKQATIVPSM 540 RTRTKVQMQG VAVGRAVDLT VLKNYDDLID ELEKMFDIKG ELRVQNKWAV TFTDDEDDMM 600 LVGDDPWPEF CSLVKRIFIY SKEEVKKMKC KHSAASSEGE GTMLSPDSQN KDETQQISCD 660 LTA

Sequence ? help Back to Top

Protein Sequence Length: 663 aa Download sequence

MEQLQASTNQ ELNQELSQQI PLFNLPSKIL CRVVHIQLLA EQETDEVYAR ITLLPEANQN  60
EPTSPDPSVP ETQKQTFHYF SKILTASDTS THGGFSVLRR HATECLPQLD MTQTTPTQEL  120
VAKDLHGFEW KFKHIFRGQP RRHLLTTGWS TFVTSKRLVA GDAFVFLRGE DGELRVGVRR  180
LARQQSPMPS SVISSQSMHL GVLATASHAV LTSTMFVVYY KPRTSQFIIG VNKYLDAINN  240
KFSVGMRFKM RFEVEDSPER RFSGTIVGVG DVSPGWPNSP WRSLKVQWDE PAIIPRPEMV  300
SPWEIEPFGA STALNVAQPA VKSKRSRPAE VSSEIAPNSL APAFWYHGPS LSHDPTQLGS  360
AAENQSNENP VVWSSRQKEI NGNPVNANSS SSKVRAEGMW SSSPHLNASC NFFPDPKNNK  420
AVATQLSVSG SYPPVSSERN DDLAHDPVES GKKTENPMDC WVFGVNLTNN FTNVTLPEKE  480
IGCPAIIPSG PKDSIAVAAC ETEAAQNPNY SLSNKEQMQV ISDASPNEKQ TKQATIVPSM  540
RTRTKVQMQG VAVGRAVDLT VLKNYDDLID ELEKMFDIKG ELRVQNKWAV TFTDDEDDMM  600
LVGDDPWPEF CSLVKRIFIY SKEEVKKMKC KHSAASSEGE GTMLSPDSQN KDETQQISCD  660
LTA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61830.1	1e-164	ARF family protein