PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027350980.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB_related
Protein Properties Length: 278aa    MW: 30814 Da    PI: 10.0258
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027350980.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.47.9e-143781147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +W++eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
   XP_027350980.1 37 RESWSEEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 81
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MNNINSSSCQ SMAMAPSIPT NGSGKKVRKP YTITKSRESW SEEEHDKFLE ALQLFDRDWK  60
KIEDFVGSKT VIQIRSHAQK YFLKVQKNGT IAHVPPPRPK RKAAHPYPQK APKNVLVPLP  120
ASMAYVSSSS TFPHGYATWD ENSLRTNEGS NKSVPCQDGL TDLHGNEAHI GSKGTTRIGH  180
SSLSGVGNST RKLIEMPKQG KQASVLQGLP DFAEVYSFIG SVFDPETKGH VQKLKEMDPI  240
NFETRKALLS YNVMTKIIGV NEGIDVKKQR NDVSCQTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.14e-96MYB_related family protein