PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027350979.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 298aa MW: 33011.6 Da PI: 9.9276 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.2 | 8.8e-14 | 37 | 81 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +W++eE++++++a +++ + Wk+I +g +t q++s+ qky XP_027350979.1 37 RESWSEEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 81 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 298 aa Download sequence |
MNNINSSSCQ SMAMAPSIPT NGSGKKVRKP YTITKSRESW SEEEHDKFLE ALQLFDRDWK 60 KIEDFVGSKT VIQIRSHAQK YFLKVQKNGT IAHVPPPRPK RKAAHPYPQK APKNVLVPLP 120 ASMAYVSSSS TFPHGYATWD ENSLRTNEGS NKSVPCQDGL TDLHGNEAHI GSKGTTRIGH 180 SSLSGVGNST RKLIEMPKQG KQASVLQGLP DFAEVYSFIG SVFDPETKGH VQKLKEMDPI 240 NFETVLLLMK NLSVNLSSPD FDPIRKALLS YNVMTKIIGV NEGIDVKKQR NDVSCQTT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G09600.1 | 1e-111 | MYB_related family protein |