PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350957.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 464aa MW: 50808.3 Da PI: 9.206

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350957.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.5	2.4e-05	75	97	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_027350957.1 75 FVCEICHKGFQRDQNLQLHRRGH 97 89*******************88 PP
2	zf-C2H2	12.3	0.00052	151	173	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_027350957.1 151 WKCEKCSKIYAVQSDWKAHSKTC 173 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MFPTAISNST SLSEDASVSS GTKIQDLGGL NHVVSNICPQ QPQKIKKKRS LPGNPDPDAE 60 VIALSPKTLL ATNRFVCEIC HKGFQRDQNL QLHRRGHNLP WKLKQRNSKE VKKKAYVCPE 120 PSCVHHNPSR ALGDLTGIKK HYCRKHGEKK WKCEKCSKIY AVQSDWKAHS KTCGTREYRC 180 DCGTLFSRKD SFITHRAFCD ALAEESARIS ANQLVATNTT NPLAQSLFLF QTQQNFQNHQ 240 ITNFNHWDSS QENPNPSNIA TALHIKPEAQ NFHNPTPSSP SPLLQQPHNE QPPNKSMITS 300 TFGNLHVPSA ATSAYMSATA LLQKAATVGA AAITGLGPGP AAVGVGQHRS MCHVTQLGTG 360 EFGTLSQLDP VVPDYMRGFP IRSLKSDRLT RDFLGLTGDA NGGVDGGNGG AVDVSMNVKD 420 MLTFTGGVEY HQPHSQHHHH ALMKPQQRFG FLGTTTAPET WGNC

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MFPTAISNST SLSEDASVSS GTKIQDLGGL NHVVSNICPQ QPQKIKKKRS LPGNPDPDAE  60
VIALSPKTLL ATNRFVCEIC HKGFQRDQNL QLHRRGHNLP WKLKQRNSKE VKKKAYVCPE  120
PSCVHHNPSR ALGDLTGIKK HYCRKHGEKK WKCEKCSKIY AVQSDWKAHS KTCGTREYRC  180
DCGTLFSRKD SFITHRAFCD ALAEESARIS ANQLVATNTT NPLAQSLFLF QTQQNFQNHQ  240
ITNFNHWDSS QENPNPSNIA TALHIKPEAQ NFHNPTPSSP SPLLQQPHNE QPPNKSMITS  300
TFGNLHVPSA ATSAYMSATA LLQKAATVGA AAITGLGPGP AAVGVGQHRS MCHVTQLGTG  360
EFGTLSQLDP VVPDYMRGFP IRSLKSDRLT RDFLGLTGDA NGGVDGGNGG AVDVSMNVKD  420
MLTFTGGVEY HQPHSQHHHH ALMKPQQRFG FLGTTTAPET WGNC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02670.1	1e-113	C2H2 family protein