PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350434.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 422aa MW: 47255.8 Da PI: 9.2014

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350434.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.1	3.8e-17	58	117	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g XP_027350434.1 58 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 117 57*****************766644468557***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MASSSSDPGK SAETSEVAVA SDQMLLYRGL KKAKKERGCT AKERISKMPP CAAGKRSSIY 60 RGVTRHRWTG RYEAHLWDKS TWNQNQNKKG KQVYLGAYDD EEAAARAYDL AALKYWGPGT 120 LINFPVTDYT RDLEEMQNVS REEYLASLRR YAFCRKSSGF SRGLSKYRGL SSRWEPSYGR 180 MAGSDYFNSI HYAAGEDSAA ESEYVSGFCL ERKIDLTSHI KWWGSNKSRQ PDNTGTRLSE 240 EKKLGSAGDI CSELKQLEQR VQPTEPYKMP QLGKPHDEKR RRSSSVSALS VLSQSAAYKS 300 LQEKASKRQE NSTDNDENEN KNTVNKLDHG KAVEKLSNHD GGSDRLDITM GMSGTMSLQR 360 NVYPLMPFLS APLLTAYNTV DPLADPVLWT SLAPMLPAGL SRTAEVTKTE TSSTYTMFQP 420 EE

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MASSSSDPGK SAETSEVAVA SDQMLLYRGL KKAKKERGCT AKERISKMPP CAAGKRSSIY  60
RGVTRHRWTG RYEAHLWDKS TWNQNQNKKG KQVYLGAYDD EEAAARAYDL AALKYWGPGT  120
LINFPVTDYT RDLEEMQNVS REEYLASLRR YAFCRKSSGF SRGLSKYRGL SSRWEPSYGR  180
MAGSDYFNSI HYAAGEDSAA ESEYVSGFCL ERKIDLTSHI KWWGSNKSRQ PDNTGTRLSE  240
EKKLGSAGDI CSELKQLEQR VQPTEPYKMP QLGKPHDEKR RRSSSVSALS VLSQSAAYKS  300
LQEKASKRQE NSTDNDENEN KNTVNKLDHG KAVEKLSNHD GGSDRLDITM GMSGTMSLQR  360
NVYPLMPFLS APLLTAYNTV DPLADPVLWT SLAPMLPAGL SRTAEVTKTE TSSTYTMFQP  420
EE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41710.2	1e-167	AP2 family protein