PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350433.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 417aa MW: 46615.1 Da PI: 9.1945

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350433.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.2	3.7e-17	58	117	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g XP_027350433.1 58 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 117 57*****************766644468557***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MASSSSDPGK SAETSEVAVA SDQMLLYRGL KKAKKERGCT AKERISKMPP CAAGKRSSIY 60 RGVTRHRWTG RYEAHLWDKS TWNQNQNKKG KQVYLGAYDD EEAAARAYDL AALKYWGPGT 120 LINFPVTDYT RDLEEMQNVS REEYLASLRR KSSGFSRGLS KYRGLSSRWE PSYGRMAGSD 180 YFNSIHYAAG EDSAAESEYV SGFCLERKID LTSHIKWWGS NKSRQPDNTG TRLSEEKKLG 240 SAGDICSELK QLEQRVQPTE PYKMPQLGKP HDEKRRRSSS VSALSVLSQS AAYKSLQEKA 300 SKRQENSTDN DENENKNTVN KLDHGKAVEK LSNHDGGSDR LDITMGMSGT MSLQRNVYPL 360 MPFLSAPLLT AYNTVDPLAD PVLWTSLAPM LPAGLSRTAE VTKTETSSTY TMFQPEE

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MASSSSDPGK SAETSEVAVA SDQMLLYRGL KKAKKERGCT AKERISKMPP CAAGKRSSIY  60
RGVTRHRWTG RYEAHLWDKS TWNQNQNKKG KQVYLGAYDD EEAAARAYDL AALKYWGPGT  120
LINFPVTDYT RDLEEMQNVS REEYLASLRR KSSGFSRGLS KYRGLSSRWE PSYGRMAGSD  180
YFNSIHYAAG EDSAAESEYV SGFCLERKID LTSHIKWWGS NKSRQPDNTG TRLSEEKKLG  240
SAGDICSELK QLEQRVQPTE PYKMPQLGKP HDEKRRRSSS VSALSVLSQS AAYKSLQEKA  300
SKRQENSTDN DENENKNTVN KLDHGKAVEK LSNHDGGSDR LDITMGMSGT MSLQRNVYPL  360
MPFLSAPLLT AYNTVDPLAD PVLWTSLAPM LPAGLSRTAE VTKTETSSTY TMFQPEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41710.1	1e-166	AP2 family protein