PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350392.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 293aa MW: 31310.5 Da PI: 6.3709

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350392.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.3	7.5e-10	142	186	5	54
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P+ + K + a++L + v+Y+k L XP_027350392.1 142 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 186 99*********************55......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MANNPSDTPA DDFFEQILGL PTFASADSGL AAADVGLAGT ASPAPMMLQL NSADANPHLA 60 AGAAFHAPVY QLGLSLDQGK GGFMKPEDAS ASGKRFRDDV VDGRAKNVFH GQPMPTTMPA 120 APHPPAIRPR VRARRGQATD PHSIAERLRR ERIAERIRAL QELVPSVNKT DRAAMLDEIV 180 DYVKFLRLQV KVLSMSRLGG AGAVAPLVTD IPLSSVEEEG GEGARNRPAW DKWSNDGTER 240 QVAKLMEENV GAAMQFLQSK ALCIMPISLA SAIYQSQPPD TSSIVKPETN PPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	147	152	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02590.2	1e-113	bHLH family protein