PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350159.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 511aa MW: 56939.5 Da PI: 10.185

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350159.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.6	5.7e-08	419	468	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + ++ k+Rt ++k++w ++ XP_027350159.1 419 RRPFSVLEVEALVQAVEKLGTGRWRDVKQRAFdnaKHRTYVDLKDKWKTL 468 567888999********************99************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MRMKEGHSRG TYLSMELAVK LPLPVFLVCK GNMTTKGQGQ NVPERKDERI KGRSVNEKII 60 HIKGSSDGLI ETGQRASKDC SSENNVGKTS LEGRRHLDSS PNGSTARKLV NRDDDENFVQ 120 YTQLNTKNKI SGAPPDTLKL KDASPFMSDE NNSRGNSALE NSQRMYPFKK RKFFNQTSSS 180 ASDRGSQCQG IFDSSDTKVN GTNHGTAIEE SSSIAGAGQQ VHPGSRSCNV KLSIKSFKVP 240 ELFIDIPETA TIGSLKRTVM EAVTAILGDE LHVGILLQGK KVRDDSKTLI QTGISQDDKR 300 HRLGFMLEPR HTPISPSSYN EDPCFLTTGS RQKLSRQSTS LMLQQGTYNV SQERSMIKIE 360 SCPEGDLNVV SSLADTSANN NMSKCRALVA VPTINMEALA VVPFRRKSGN PDFAQRRIRR 420 PFSVLEVEAL VQAVEKLGTG RWRDVKQRAF DNAKHRTYVD LKDKWKTLVH TARIYPQQRR 480 GEPVPQELLD RVLAAHAYWS QQQCKHQLKP L

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MRMKEGHSRG TYLSMELAVK LPLPVFLVCK GNMTTKGQGQ NVPERKDERI KGRSVNEKII  60
HIKGSSDGLI ETGQRASKDC SSENNVGKTS LEGRRHLDSS PNGSTARKLV NRDDDENFVQ  120
YTQLNTKNKI SGAPPDTLKL KDASPFMSDE NNSRGNSALE NSQRMYPFKK RKFFNQTSSS  180
ASDRGSQCQG IFDSSDTKVN GTNHGTAIEE SSSIAGAGQQ VHPGSRSCNV KLSIKSFKVP  240
ELFIDIPETA TIGSLKRTVM EAVTAILGDE LHVGILLQGK KVRDDSKTLI QTGISQDDKR  300
HRLGFMLEPR HTPISPSSYN EDPCFLTTGS RQKLSRQSTS LMLQQGTYNV SQERSMIKIE  360
SCPEGDLNVV SSLADTSANN NMSKCRALVA VPTINMEALA VVPFRRKSGN PDFAQRRIRR  420
PFSVLEVEAL VQAVEKLGTG RWRDVKQRAF DNAKHRTYVD LKDKWKTLVH TARIYPQQRR  480
GEPVPQELLD RVLAAHAYWS QQQCKHQLKP L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	163	172	QRMYPFKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	2e-95	MYB_related family protein