PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350155.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 609aa MW: 67480.9 Da PI: 9.7349

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350155.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.3	7.2e-08	517	566	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + ++ k+Rt ++k++w ++ XP_027350155.1 517 RRPFSVLEVEALVQAVEKLGTGRWRDVKQRAFdnaKHRTYVDLKDKWKTL 566 567888999********************99************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 609 aa Download sequence
MVLQKRLNYG FNGYQVPVIP KASRSARGRG TIRKKPDSSQ IQAFEILASV AGNFLQENES 60 SIPDNVSPAK DPHAYAGIII KDKHEDEGGS FKGDLFEHGT CSEIASACVL SLQGKHDNQR 120 VMGDSSFLGN HHLEGQGQNV PERKDERIKG RSVNEKIIHI KGSSDGLIET GQRASKDCSS 180 ENNVGKTSLE GRRHLDSSPN GSTARKLVNR DDDENFVQYT QLNTKNKISG APPDTLKLKD 240 ASPFMSDENN SRGNSALENS QRMYPFKKRK FFNQTSSSAS DRGSQCQGIF DSSDTKVNGT 300 NHGTAIEESS SIAGAGQQVH PGSRSCNVKL SIKSFKVPEL FIDIPETATI GSLKRTVMEA 360 VTAILGDELH VGILLQGKKV RDDSKTLIQT GISQDDKRHR LGFMLEPRHT PISPSSYNED 420 PCFLTTGSRQ KLSRQSTSLM LQQGTYNVSQ ERSMIKIESC PEGDLNVVSS LADTSANNNM 480 SKCRALVAVP TINMEALAVV PFRRKSGNPD FAQRRIRRPF SVLEVEALVQ AVEKLGTGRW 540 RDVKQRAFDN AKHRTYVDLK DKWKTLVHTA RIYPQQRRGE PVPQELLDRV LAAHAYWSQQ 600 QCKHQLKPL

Sequence ? help Back to Top

Protein Sequence Length: 609 aa Download sequence

MVLQKRLNYG FNGYQVPVIP KASRSARGRG TIRKKPDSSQ IQAFEILASV AGNFLQENES  60
SIPDNVSPAK DPHAYAGIII KDKHEDEGGS FKGDLFEHGT CSEIASACVL SLQGKHDNQR  120
VMGDSSFLGN HHLEGQGQNV PERKDERIKG RSVNEKIIHI KGSSDGLIET GQRASKDCSS  180
ENNVGKTSLE GRRHLDSSPN GSTARKLVNR DDDENFVQYT QLNTKNKISG APPDTLKLKD  240
ASPFMSDENN SRGNSALENS QRMYPFKKRK FFNQTSSSAS DRGSQCQGIF DSSDTKVNGT  300
NHGTAIEESS SIAGAGQQVH PGSRSCNVKL SIKSFKVPEL FIDIPETATI GSLKRTVMEA  360
VTAILGDELH VGILLQGKKV RDDSKTLIQT GISQDDKRHR LGFMLEPRHT PISPSSYNED  420
PCFLTTGSRQ KLSRQSTSLM LQQGTYNVSQ ERSMIKIESC PEGDLNVVSS LADTSANNNM  480
SKCRALVAVP TINMEALAVV PFRRKSGNPD FAQRRIRRPF SVLEVEALVQ AVEKLGTGRW  540
RDVKQRAFDN AKHRTYVDLK DKWKTLVHTA RIYPQQRRGE PVPQELLDRV LAAHAYWSQQ  600
QCKHQLKPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	261	270	QRMYPFKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	3e-94	MYB_related family protein