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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027350130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | GeBP | ||||||||
Protein Properties | Length: 411aa MW: 45568.3 Da PI: 4.5419 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 122.3 | 2.4e-38 | 109 | 204 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 lfqrlw++eDei lLqG++d+++++g+s ++d+ fy+++k++++++++k+qlveKirrLKkK+++ +k+ sgke+sf+++hdq +fe+s+kiW XP_027350130.1 109 LFQRLWTDEDEIELLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKIGSGKEFSFKSAHDQATFEISRKIW 203 79********************************************************************************************* PP DUF573 97 g 97 XP_027350130.1 204 S 204 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 411 aa Download sequence |
MASQQHDTVF PEEEMDDDDE ESQEDEEEEE DDDDVLVDDE ENEPSPSASS ALAVTVAVPG 60 STVSNGGNAP ISAATATATT IVVHDSPDPK RRRVEQIEEK KPLDDSRRLF QRLWTDEDEI 120 ELLQGFLDYT SQRGSSHHND TALFYDQIKS KLQLDFNKNQ LVEKIRRLKK KYRNVLNKIG 180 SGKEFSFKSA HDQATFEISR KIWSNMAPIG DNSMDDDEIN LNPIPNPNPN PNLNFSPIVP 240 KNEVMFGNSV EKKTRKRSRP RSAIKVDEKR ESIDGSASNK DQNCIRNATT TATATATATP 300 ITNTNNNSNC NSGYSNSIPS LIEETVRRCL SPLLKELVGG AMAGPFGARG LNLNPVPLMN 360 LNFGGGDLVD EKWRKQQILE LEVYSKRLEL VQDQIKATME ELRSSGGGGG G |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 90 | 94 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28040.1 | 2e-78 | GeBP family protein |