PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027349955.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 662aa    MW: 74155.7 Da    PI: 7.4551
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027349955.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.46.3e-24100202198
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+kvlt sd++++g +++ +k+a+e+       +++++ +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD++vF   + +
  XP_027349955.1 100 FCKVLTASDTSTHGGFSVLRKHATEClpmldtsQSQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFL--RGN 192
                     99*****************************99555666679************************************************..348 PP

                     EE..EEEEE- CS
              B3  89 efelvvkvfr 98 
                     +++l+v+v+r
  XP_027349955.1 193 NGQLRVGVRR 202
                     8889****98 PP
2Auxin_resp96.44.4e-32228309183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsse..rrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha++t++ F v+Y+Pr+  s+F+v+v+k+++a+++k+ vGmRf+m+fe++ds+e  +r+ Gt+vgv+d++p +W+nS WrsLk
  XP_027349955.1 228 ASHAVATQTLFVVYYKPRT--SQFIVSVNKYLEAINQKCNVGMRFRMRFEGDDSPEtdKRFCGTIVGVEDISP-HWENSTWRSLK 309
                     789***************6..9********************************9833567**********99.*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 662 aa     Download sequence    
MEGMCRTSCG SSSCRPKGLL FPSGTHGTKV STNQELNQRI PLFKLPSKIL CRVVNVHLLA  60
EQETDEVYAQ ITLVPESNKT EPTSPDPCPA EHPRPRVNSF CKVLTASDTS THGGFSVLRK  120
HATECLPMLD TSQSQSTPTQ ELVAKDLHGY EWRFKHIFRG QPRRHLLTTG WSTFVTSKRL  180
VAGDTFVFLR GNNGQLRVGV RRVAPLQNSM PSSVISSQSM HIGVLATASH AVATQTLFVV  240
YYKPRTSQFI VSVNKYLEAI NQKCNVGMRF RMRFEGDDSP ETDKRFCGTI VGVEDISPHW  300
ENSTWRSLKV QWDEAASIPR PDRVSPWEIE PLIASVPTSL SQHSVVKNKR PRPASEFPDL  360
VDTPLAASTF WNSGMTHSEM TKLSVMAESK RSDNSIHMWH HKQNDNSKIS SNGISMNQTE  420
ASWLSSRSCA PSHFYHDTTD DNKSVAAWPI SKTHSERLNS DHLHDKFEKD ITKLEAATSC  480
RLFGIELIDH ARNNSPSVEK TLVDATNACG VTSESRTDVR LKCDISMASK EWKKEQPQVS  540
PKETQIKQIG SRSCTKVRMQ GVAVGRAVDL TTLNGYDQLV DELEKMFDIN GQLQSRDKWE  600
IVFTDDEGDM MLVGDDPWPE FCNMVRRIFI CSSQDVHKMS SGSKLPISSI EEETVISDTA  660
HT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1349353KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23980.10.0ARF family protein