PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027349954.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 683aa    MW: 76673.4 Da    PI: 6.7423
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027349954.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.46.6e-24121223198
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+kvlt sd++++g +++ +k+a+e+       +++++ +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD++vF   + +
  XP_027349954.1 121 FCKVLTASDTSTHGGFSVLRKHATEClpmldtsQSQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFL--RGN 213
                     99*****************************99555666679************************************************..348 PP

                     EE..EEEEE- CS
              B3  89 efelvvkvfr 98 
                     +++l+v+v+r
  XP_027349954.1 214 NGQLRVGVRR 223
                     8889****98 PP
2Auxin_resp96.34.6e-32249330183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsse..rrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha++t++ F v+Y+Pr+  s+F+v+v+k+++a+++k+ vGmRf+m+fe++ds+e  +r+ Gt+vgv+d++p +W+nS WrsLk
  XP_027349954.1 249 ASHAVATQTLFVVYYKPRT--SQFIVSVNKYLEAINQKCNVGMRFRMRFEGDDSPEtdKRFCGTIVGVEDISP-HWENSTWRSLK 330
                     789***************6..9********************************9833567**********99.*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 683 aa     Download sequence    
MSLNQGGGGG GEEDELYEQL WKACAGPHVE VPRAGQRVFY FPQGHMEQLE VSTNQELNQR  60
IPLFKLPSKI LCRVVNVHLL AEQETDEVYA QITLVPESNK TEPTSPDPCP AEHPRPRVNS  120
FCKVLTASDT STHGGFSVLR KHATECLPML DTSQSQSTPT QELVAKDLHG YEWRFKHIFR  180
GQPRRHLLTT GWSTFVTSKR LVAGDTFVFL RGNNGQLRVG VRRVAPLQNS MPSSVISSQS  240
MHIGVLATAS HAVATQTLFV VYYKPRTSQF IVSVNKYLEA INQKCNVGMR FRMRFEGDDS  300
PETDKRFCGT IVGVEDISPH WENSTWRSLK VQWDEAASIP RPDRVSPWEI EPLIASVPTS  360
LSQHSVVKNK RPRPASEFPD LVDTPLAAST FWNSGMTHSE MTKLSVMAES KRSDNSIHMW  420
HHKQNDNSKI SSNGISMNQT EASWLSSRSC APSHFYHDTT DDNKSVAAWP ISKTHSERLN  480
SDHLHDKFEK DITKLEAATS CRLFGIELID HARNNSPSVE KTLVDATNAC GVTSESRTDV  540
RLKCDISMAS KEWKKEQPQV SPKETQIKQI GSRSCTKVRM QGVAVGRAVD LTTLNGYDQL  600
VDELEKMFDI NGQLQSRDKW EIVFTDDEGD MMLVGDDPWP EFCNMVRRIF ICSSQDVHKM  660
SSGSKLPISS IEEETVISDT AHT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1370374KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23980.10.0ARF family protein