PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027349904.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | HD-ZIP | ||||||||
Protein Properties | Length: 825aa MW: 89794.8 Da PI: 6.2487 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 67.4 | 1.9e-21 | 125 | 180 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++eLe+lF+++++p++++r eL+k+l+L++rqVk+WFqNrR+++k XP_027349904.1 125 KKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLNLETRQVKFWFQNRRTQMK 180 688999***********************************************999 PP | |||||||
2 | START | 207.5 | 5.2e-65 | 336 | 560 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS START 1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 ela++a++elvk+a+ +ep+W +s e++n +e++++ ++ + + +ea+r++g+v+ ++ lve+l+d++ +W e+++ + +t+ XP_027349904.1 336 ELALAAMDELVKMAQTGEPLWIRSLeggrEILNHEEYTRTMTPCIGlkpsgFVSEASRETGMVIINSLALVETLMDSN-RWLEMFPcviaRTSTT 429 5899*************************************99988999999**************************.**************** PP EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS START 83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170 evissg galqlm aelq+lsplvp R++ f+R+++q+ +g+w++vdvS++ ++ + + +v +++lpSg+++++++ng+skvtwveh+ XP_027349904.1 430 EVISSGingtrnGALQLMHAELQVLSPLVPvREVNFLRFCKQHAEGVWAVVDVSIETIRETSGAPTFVNCRRLPSGCVVQDMPNGYSKVTWVEHA 524 ************************************************************999******************************** PP E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206 +++++++h+l+r+l++sg+ +ga++wvatlqrqce+ XP_027349904.1 525 EYEESQVHQLYRPLLSSGMGFGAQRWVATLQRQCEC 560 **********************************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 825 aa Download sequence |
MSFGGFLEKK QGGGGARIVA DIAYNNGSNH NNSISNDRMP SSAISQPRLA TPTLAKSMFN 60 SPGLSLALQS DIDGQEDVNR LMAESFEGNG LRRNREEEHE SRSGSDNMDG GSGDDFDAAD 120 NPPRKKRYHR HTPQQIQELE ALFKECPHPD EKQRLELSKR LNLETRQVKF WFQNRRTQMK 180 TQLERHENSL LRQENDKLRA ENMSMREAMR NPICSNCGGP AMIGEISLEE QHLRIENARL 240 KDELDRVCAL AGKFLGRPVS SLASSIGPPL PNSSLELGVG SNGFGGLNTV PSTLPLGPDF 300 GVGISSSLGM VSPPSRPTTV VSTGFDRSVE RSIFLELALA AMDELVKMAQ TGEPLWIRSL 360 EGGREILNHE EYTRTMTPCI GLKPSGFVSE ASRETGMVII NSLALVETLM DSNRWLEMFP 420 CVIARTSTTE VISSGINGTR NGALQLMHAE LQVLSPLVPV REVNFLRFCK QHAEGVWAVV 480 DVSIETIRET SGAPTFVNCR RLPSGCVVQD MPNGYSKVTW VEHAEYEESQ VHQLYRPLLS 540 SGMGFGAQRW VATLQRQCEC LAILMSSAVP SREHSGVVVA AISGGGRRSM LKLAQRMTNN 600 FCAGVCASTV HKWNKLNAGN VGEDVRVMTR KSVDDPGEPP GIVLSAATSV WLPVSPQRLF 660 DFLRDDRLRS EWDILSNGGP MQEMAHIAKG QDHANSVSLL RASAMNANQS SMLILQETCT 720 DASGSLVVYA PVDIPAMHVV MNGGDSAYVA LLPSGFAIVP DGPGSSEDQG GASQQRVSGS 780 LLTVAFQILV NSLPTAKLTV ESVETVNNLI SCTVQKIKAA LHCES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G00730.1 | 0.0 | HD-ZIP family protein |